Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819776.1_cds_XP_016500173.1_14026
CDS Infomation

[gene=LOC107818647] [db_xref=GeneID:107818647] [protein=mitochondrial Rho GTPase 1-like] [protein_id=XP_016500173.1] [location=complement(join(44354..44427,45211..45397,45799..45949,46848..46960,48614..48680,48813..49024,49687..49768,50213..50268,51163..51231,51906..52157,52315..52491,52613..52762,52936..53068,53599..53813))] [gbkey=CDS]
Sequence

ATGGCAGGAGGTGGTTCAGCTGCTGGAAAGGGTAATGCACCCAGTGTTCGAATAGTGGTT
GCTGGTGATGCCAAGACTGGAAAGTCTAGTTTGATCTTGACGGCAGCCACTGATTCTTAT
CCGCCCAATGTCCCTCCAGTGTTGCCTCCGACTAGGCTACCTGATGATATCTACCCTGAT
CGAGTACCTGTAACTATTATTGATACGTCTTCAAGTCCAGAAAATAGAGGTAAACTTGTG
GAAGAGCTGAAGAGAGCTGATGCAGTTGTACTGACTTACGCTTGTGATAAGCCTGCGACT
CTTGATCGTCTGAGTACTTTCTGGCTTCCTGAACTCCGCAGATTGGAGGTTCGGGTTCCT
GTCATTGTCGTGGGTTGCATGCTTGATAAAAGGGACGAACAGATTCCAGTCAGTTTGGAG
CAGGTGATGTCACCAATTATGCAACAATTTCGGGAGATTGAAACGTGTATTGAATGTTCA
GCATACAGACATATCCAGATTCCCGAGGTTTTCTACTATGCCCAAAAAGCTGTGCTTCAT
CCAACAGCTCCACTATTTGATCAGGAGGCCCAAACTTTAAAGCCACGATGCGTTAGGGCT
TTGAAGCGGATATTTATTCTTTGTGATCTTGATAGAGATGGTGCCCTAAGTGATGCAGAG
TTAAATGATTTTCAGGTCAAATGCTTCAATGCTCCATTGCAGCCTTCCGAGATAGTCGGT
GTTAAGAGAGTTGTGCAAGATAAATTACCTGATGGTGTCAATGAACGGGGTCTTACATTG
ACAGGTTTCCTGTTTCTTCATGCACTGTTTATTGAAAAAGGGCGTCTGGAGACAACGTGG
ACTGTCCTGCGGAAATTTGGCTACAACAACGAGATCAGGCTTAGTGAGGATCAGCTTCCT
ACTCCCATCAAGAAACAACCTGACCAGAGTGTTGAGCTGACCAATGAAGTATTGGACTTC
CTCAGAAGAATCTTCCATACGTTCGACATTGATAGTGATGAGGCACTTCGATCGAATGAG
CTAGATGACTTGTTTTCCACTGCACCCGAGAACCCCTGGTCTGAAGCTCCATACAAGGAT
GCTGCAGAGAAGGATGCCTTGGGAGGACTCTCTCTTGATGGTTTTCTTTCGGAGTGGGCA
CTGATGACACTTCTTGATCCCATTTATAGTGTGGAGAATCTTATATACATTGGATATGCT
GGTGAGCCTTCATCTGCTATTCGTGTAACTCGAAGAAGACGGTTAGATCGCAAGAAGCAG
CAATCAGATAGAAATGTCTATCAGTGTTTTGTTTTTGGGCCAAAAGAGGCTGGAAAATCA
GCCATTCTTAATTCGTTTATTGGAAGGCCATTCCCAGAAGAGTACGAATCAACTACTGCT
GATCAATATGGAGTAAATATTGTTGATCTGGGGGGGACTAAAAAAACTCTTGTGCTACGG
GAGATACCAGAAGATGGAGTGAAAAAGCTTTTATCTAGCAAGGATGCTTTAGCAGATTGT
GATATAGCAATATTTGTCCATGATAGTTCACGTGAAACTTCCTGGAAGAGAGCAGCAGAT
TTACTGGTGGATGTTGCTAGCCATGGAGAGGCCACTGGGCATGAGGTGCCGTGTCTCATT
GTAGCTGCCAAGGATGATCTGGATCCTTATTTGACCGAAATTCAAGATTCAACAAGGGTT
AGCCAGGATTTAGGGATAGAAGCGCCCATACCAATCAGCACGAAGCTTGGAGATTTTAGT
AATTTGTTCCGAAGGATTGTTAATGCAGCAGAGCATCCACATTTGAGCATTCCTGAAACT
GAAGCAGGAAGAAGCCGTAAGCAATATCATCGGCTCATCAATCGATCTCTCATGTTTGTA
TCAGTTGGAGCTGCTGTAGCTGTTGTAGGACTTGCAGCTTACCGTGTTTATGCTGCACGG
AAGAATGCATCGAGCTGA

Peptide Sequence

PEP ID

XP_016500173.1
PEP Infomation

PREDICTED: mitochondrial Rho GTPase 1-like [Nicotiana tabacum]
Sequence

MAGGGSAAGKGNAPSVRIVVAGDAKTGKSSLILTAATDSYPPNVPPVLPPTRLPDDIYPD
RVPVTIIDTSSSPENRGKLVEELKRADAVVLTYACDKPATLDRLSTFWLPELRRLEVRVP
VIVVGCMLDKRDEQIPVSLEQVMSPIMQQFREIETCIECSAYRHIQIPEVFYYAQKAVLH
PTAPLFDQEAQTLKPRCVRALKRIFILCDLDRDGALSDAELNDFQVKCFNAPLQPSEIVG
VKRVVQDKLPDGVNERGLTLTGFLFLHALFIEKGRLETTWTVLRKFGYNNEIRLSEDQLP
TPIKKQPDQSVELTNEVLDFLRRIFHTFDIDSDEALRSNELDDLFSTAPENPWSEAPYKD
AAEKDALGGLSLDGFLSEWALMTLLDPIYSVENLIYIGYAGEPSSAIRVTRRRRLDRKKQ
QSDRNVYQCFVFGPKEAGKSAILNSFIGRPFPEEYESTTADQYGVNIVDLGGTKKTLVLR
EIPEDGVKKLLSSKDALADCDIAIFVHDSSRETSWKRAADLLVDVASHGEATGHEVPCLI
VAAKDDLDPYLTEIQDSTRVSQDLGIEAPIPISTKLGDFSNLFRRIVNAAEHPHLSIPET
EAGRSRKQYHRLINRSLMFVSVGAAVAVVGLAAYRVYAARKNASS

Transcript Sequence

Gene sequence data has not been registered.